CDS

Accession Number TCMCG075C20270
gbkey CDS
Protein Id XP_017978888.1
Location join(23442387..23442704,23443198..23443254,23443574..23443756,23443895..23443979,23444121..23444211,23444282..23444446,23445176..23445298,23445424..23445499,23446199..23446358,23446438..23447429)
Gene LOC18596775
GeneID 18596775
Organism Theobroma cacao

Protein

Length 749aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018123399.1
Definition PREDICTED: auxin response factor 3 isoform X1 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001708        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009850        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010022        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010050        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010158        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010582        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGGATTAATCGATCTGAACACAACGGAAGACGATGAAACGCCGTCATATGGTTCTTTATCTCCATCTTCGTCCTCAACTTCGGTGTTAAGTGCTTCTGGGATAAGTGCACCTGGTTCCGCTTCTAGTTCTTCAGTTTGTTTAGAGCTTTGGCATGCTTGTGCTGGACCACTTATATCTTTGCCGAAGAGAGGAAGTGTAGTGGTGTACTTCCCTCAGGGCCACTTGGAACAAGTTTCCGATTTTTCCGGCGTTGCTGCAGCTTATGATCTCCCTCCCCACGTGTTTTGTCGGGTTGTTGATGTCAAACTACATGCAGAGGCTGCAACAGACGAGGTTTACGCTCAAGTTTCACTGGTTCCTGAAAGTGAGCAAACTGAGCAGAAGTTGCGGGAAGGGAAGATAGAAGCCGGTGGTGAAGAGGAGGATGTCGAAGCAGATATCAAGTCAACGACGCCCCACATGTTCTGCAAGACCCTTACGGCTTCTGATACCAGTACACATGGAGGCTTCTCTGTTCCGCGTCGAGCTGCTGAGGACTGCTTCCCGCCCTTGGATTATAATCAGCAGAGGCCCTCACAAGAGCTTGTTGCAAAAGACCTTCATGGCTTGGAATGGAGGTTTCGACACATTTATAGGGGGCAACCTCGGAGACATTTGCTCACTACTGGATGGAGTGCTTTTGTAAACAAGAAGAAGCTTGTCTCTGGAGATGCTGTGCTCTTTCTTAGGGGTGAGGATGGAGAACTAAGGCTGGGTATTCGAAGAGCTGCTCAAATTAAAAATGGCACATCTTTTCCATCTTTGTGCAGCCAGCAGTTGAACCGCAGCAATTTTGCAGATGTAGTCCATGCTATATCTATGAAAAGTGTTTTTAGCATTTACTACAATCCAAGCAGAGCCAGTTCATCAGAGTTCATAATACCAGTGCATAAATTCTGGAAGAGTCTTGATCATTCTTTTGCTGTTGGAATGAGGTTCAAAATGCGTTTTGAAACTGAAGATGCAGCAGAACGAAGATACACAGGACTCGTAACTGGAATCAGTGATATGGATCCTGTTAGATGGCCTGGTTCAAAATGGAGATGCCTGCTGGTAAGGTGGGATGATATCGATGCTAATAGGCATAGCAGGGTTTCTCCCTGGGAAATTGAGCTGTCTGGTACAATTTCTAGTTCTAACAACTTGCTTACACCTGGTGTGAAAAGGAACAGGATTGGATTGCCTTCAGGAAAACCAGAATTTATGGTTCCTGATGGAATTGGAGCATCTGACTTTGGGGAACCTTTGCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATCTTGGGTTTTAACACTCTTTATGATGGTGCTGATGGTCAGAATCTGCATCGGTCTGAAATAAGGCGGTGCTTTCCTGGTTCCAATGGTTCTGGTATTGTTGCAATAGGAAATGTTGGTAGAGACCCACTGGGGAATTCCGAAATTTCCTATAGAGGTGTAGGCTTTGGGGAATCTTTCCGATTCCATAAGGTCTTGCAAGGTCAAGAAATTTATGTAAGCCCTCCATATATTAGAGGTCCAACTACAAATGATACTCAAGAAAATGATGGTCTTGGAGTCCGAGATGCTGGTCAGTTTTCGGGAACAAGAAGTGGATGGTCTTCCTTGATGCAGAGCTATAATACTCATAGTCATATACGGCCATCTGCACCATCTGCACAAGTGTCTTCACCATCTTCGGTGTTAATGTTCCAGCAAGCAAGCAATCCAATTCCAAACATCAATCCTATTTATAGCGTCAATAACCAGGAAAAGGAGCAGGGAGTTGACAACCGGAGTTCTTTTCGTGCACCTGAAATGTATGGGGGAAAGTTATTGCAATCTTCAACTGGTGAATGCAGTTCCCGTGGGAGGCATCATGGAACCTTTGACTCGTTTGGCCACTCAAATGATTCTGTTCAACTTGGTGACTCACAACCTCTTGCAGCTCAACCAACATTTAGGACTAGTCAAGATATAGCTTCCTCGTGTAAAAGTAGCTGCAGACTTTTTGGATTCTCCTTGACTGAGGGAAGTCAGGATGCTAATAAGGAGGACAACATGGTGAAAGCGACCTTATCATTGGGTCCTGGAGCTTTTTTACCTTGTATTGGCGAGCAGTTTCACCCAAAGCCTCCAGCAGTGACAAACACAGTGGGAAGCAATTGTACCAAAGTAAGCAACCTCTATGCTGTCAGAGATTTGCTTTTTGATATTGCATTATAG
Protein:  
MGGLIDLNTTEDDETPSYGSLSPSSSSTSVLSASGISAPGSASSSSVCLELWHACAGPLISLPKRGSVVVYFPQGHLEQVSDFSGVAAAYDLPPHVFCRVVDVKLHAEAATDEVYAQVSLVPESEQTEQKLREGKIEAGGEEEDVEADIKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQIKNGTSFPSLCSQQLNRSNFADVVHAISMKSVFSIYYNPSRASSSEFIIPVHKFWKSLDHSFAVGMRFKMRFETEDAAERRYTGLVTGISDMDPVRWPGSKWRCLLVRWDDIDANRHSRVSPWEIELSGTISSSNNLLTPGVKRNRIGLPSGKPEFMVPDGIGASDFGEPLRFQKVLQGQEILGFNTLYDGADGQNLHRSEIRRCFPGSNGSGIVAIGNVGRDPLGNSEISYRGVGFGESFRFHKVLQGQEIYVSPPYIRGPTTNDTQENDGLGVRDAGQFSGTRSGWSSLMQSYNTHSHIRPSAPSAQVSSPSSVLMFQQASNPIPNINPIYSVNNQEKEQGVDNRSSFRAPEMYGGKLLQSSTGECSSRGRHHGTFDSFGHSNDSVQLGDSQPLAAQPTFRTSQDIASSCKSSCRLFGFSLTEGSQDANKEDNMVKATLSLGPGAFLPCIGEQFHPKPPAVTNTVGSNCTKVSNLYAVRDLLFDIAL